Basic Information
Locus ID:
AsparagusV1_02.1173.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 32478824 | 32480962 | - | AsparagusV1_02.1173.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 80,892.36 Da | 40.12 | 64.02 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 1.30936E-20 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 1.6E-19 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 464 | 671 | 1.9E-73 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 62 | 126 | 4.97E-21 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 63 | 166 | 5.3E-23 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 2.5E-22 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 17.786123 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 8.4E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 8.4E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 8.4E-12 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 302 | - | - |
| Coils | Coil | Coil | 267 | 290 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_020253539.1 | uncharacterized protein LOC109830633 [Asparagus officinalis] | 0 |
| Q8TQR1 | Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A5P1FHT2 | J domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F11730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology