Basic Information
Locus ID:
AsparagusV1_01.694.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 12742270 | 12745733 | + | AsparagusV1_01.694.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.43 | 48,821.14 Da | 37.72 | 79.37 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 91 | 369 | 1.99018E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 90 | 364 | 3.4E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 60 | 366 | 3.1E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 171 | 378 | 1.0E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 59 | 170 | 1.9E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 85 | 370 | 42.520031 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 91 | 119 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09830.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020276044.1 | probable serine/threonine-protein kinase PBL19 [Asparagus officinalis] | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FMG1 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F6940 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology