Basic Information
Locus ID:
AsparagusV1_01.555.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 10058901 | 10060280 | - | AsparagusV1_01.555.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 51,707.76 Da | 41.03 | 94.44 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 135 | 407 | 2.18864E-94 | - |
| Pfam | PF00069 | Protein kinase domain | 129 | 403 | 1.2E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 111 | 428 | 2.02E-78 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 1 | 144 | 2.73E-8 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 1 | 71 | 2.3E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 91 | 204 | 5.3E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 205 | 412 | 4.3E-62 | - |
| SMART | SM00220 | serkin_6 | 129 | 404 | 1.2E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 129 | 412 | 39.057201 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 253 | 265 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 135 | 158 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_020274502.1 | LOW QUALITY PROTEIN: probable L-type lectin-domain containing receptor kinase S.7 [Asparagus officinalis] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FM97 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F5550 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology