Basic Information
Locus ID:
AsparagusV1_01.512.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 9505789 | 9510861 | + | AsparagusV1_01.512.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 73,922.99 Da | 42.58 | 80.82 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 337 | 631 | 4.52867E-127 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 306 | 617 | 5.1E-94 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 338 | 642 | 2.81E-70 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 339 | 637 | 5.0E-44 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 185 | - | - |
| Coils | Coil | Coil | 216 | 236 | - | - |
| Coils | Coil | Coil | 268 | 288 | - | - |
| Coils | Coil | Coil | 142 | 162 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_020274169.1 | probable galacturonosyltransferase 4 [Asparagus officinalis] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FLW7 | Hexosyltransferase OS=Asparagus officinalis OX=4686 GN=A4U43_C01F5120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology