Basic Information
Locus ID:
AsparagusV1_01.3626.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
calcium-binding protein CML14
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 132042182 | 132042694 | - | AsparagusV1_01.3626.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 18,868.23 Da | 45.73 | 86.77 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 96 | 158 | 3.79598E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 95 | 157 | 3.6E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 20 | 82 | 2.7E-11 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 3 | 158 | 9.04E-41 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 163 | 3.1E-44 | - |
| SMART | SM00054 | efh_1 | 96 | 124 | 4.0E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 21 | 49 | 0.0015 | IPR002048 |
| SMART | SM00054 | efh_1 | 132 | 160 | 4.4E-8 | IPR002048 |
| SMART | SM00054 | efh_1 | 57 | 85 | 0.35 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 53 | 88 | 9.882769 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 17 | 52 | 14.42972 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 132 | 163 | 12.365459 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 92 | 127 | 14.401823 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 141 | 153 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 30 | 42 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 66 | 78 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 105 | 117 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_020250551.1 | probable calcium-binding protein CML15 [Asparagus officinalis] | 0 |
| Q6L5F4 | Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FVK3 | Calcium-binding protein CML14 OS=Asparagus officinalis OX=4686 GN=A4U43_C01F36260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology