Basic Information
Locus ID:
AsparagusV1_01.3593.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 131535605 | 131539136 | + | AsparagusV1_01.3593.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 54,695.71 Da | 44.26 | 89.63 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 174 | 440 | 7.50177E-102 | - |
| Pfam | PF00069 | Protein kinase domain | 169 | 437 | 1.7E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 150 | 447 | 8.09E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 244 | 455 | 5.1E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 149 | 243 | 1.1E-34 | - |
| SMART | SM00220 | serkin_6 | 168 | 446 | 1.1E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 168 | 447 | 38.590778 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 290 | 302 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 174 | 197 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 487 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 477 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020248717.1 | probable receptor-like protein kinase At2g42960 [Asparagus officinalis] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5P1FVF2 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F35930 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology