Basic Information
Locus ID:
AsparagusV1_01.3480.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
GDSL-like Lipase/Acylhydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 129521777 | 129542533 | - | AsparagusV1_01.3480.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 84,393.27 Da | 41.42 | 77.27 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd19821 | Bbox1_BBX-like | 548 | 580 | 1.11702E-9 | - |
| CDD | cd01837 | SGNH_plant_lipase_like | 27 | 336 | 6.4099E-124 | IPR035669 |
| Pfam | PF01513 | ATP-NAD kinase | 377 | 408 | 7.5E-8 | IPR002504 |
| Pfam | PF00657 | GDSL-like Lipase/Acylhydrolase | 29 | 331 | 2.1E-31 | IPR001087 |
| SUPERFAMILY | SSF52266 | SGNH hydrolase | 148 | 333 | 6.04E-5 | - |
| SUPERFAMILY | SSF111331 | NAD kinase/diacylglycerol kinase-like | 357 | 548 | 2.09E-29 | IPR016064 |
| Gene3D | G3DSA:3.40.50.10330 | - | 343 | 471 | 2.7E-17 | IPR017438 |
| Gene3D | G3DSA:3.40.50.1110 | SGNH hydrolase | 17 | 340 | 6.2E-74 | IPR036514 |
| Gene3D | G3DSA:2.60.200.30 | - | 472 | 548 | 1.5E-13 | IPR017437 |
| SMART | SM00336 | bboxneu5 | 543 | 580 | 2.6E-5 | IPR000315 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 680 | 706 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 591 | 629 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 680 | 700 | - | - |
| Coils | Coil | Coil | 231 | 251 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45670.1 | GDSL-like Lipase/Acylhydrolase superfamily protein. | 0 |
| RefSeq | XP_020274312.1 | GDSL esterase/lipase At5g45670-like [Asparagus officinalis] | 0 |
| Q9FK75 | GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana OX=3702 GN=At5g45670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FV24 | B box-type domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F34800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg21204 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_7571 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah007598, Ah007860 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_4g084970 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg19090, Sbi_jg37515 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5357 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026889 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl20570, Sgl21936, Sgl25953, Sgl27212 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000009491, gene:ENSEOMG00000028643 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4BG0017620, CQ.Regalona.r1.4BG0017640 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30163090 |
| Apiaceae | Apium graveolens | 1 | Ag2G00045 |
| Arecaceae | Cocos nucifera | 1 | COCNU_14G002520 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708952 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.3480.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri7G03611 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G78590.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10018897m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g33680.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB03g058150.2N, BniB05g074490.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G0900 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G1024 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g04200 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g35650 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-5705, nbisL1-mrna-9273 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1384 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00009431 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb7G35534 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.1655, BH03.1806, CH03.1972 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0532900, gene-QOZ80_6BG0486420 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0474800.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_004649 |
| Poaceae | Oryza coarctata | 2 | Oco17G003030, Oco18G002910 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g17680.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G158500 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0702575 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr10G011720, Chr11G010590 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG030270, gene_TRIDC5BG031970 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G186600.1, TraesCS5B02G185000.2 ... |
| Poaceae | Zea mays | 1 | Zm00001eb098430_P004 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-31039 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g30192 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG25.1345 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g17590 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.2353 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-10482 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5089 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.1386 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00001372 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-1793 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-22379 |
| Salicaceae | Populus euphratica | 2 | populus_peu17721, populus_peu17730 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132617702 |
| Solanaceae | Solanum chilense | 1 | SOLCI000985000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107024303 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_6947 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G0048 |
| Zosteraceae | Zostera marina | 1 | Zosma05g25820.v3.1 |