Basic Information
Locus ID:
AsparagusV1_01.3447.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 128993388 | 128998362 | - | AsparagusV1_01.3447.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 35,837.45 Da | 47.51 | 80.45 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73090.1 | 0 | |
| RefSeq | XP_020270276.1 | uncharacterized protein LOC109845408 [Asparagus officinalis] | 0 |
| TrEMBL | A0A5P1FWZ2 | DUF1851 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F34470 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg25121 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_5488, gene_5538 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah028639, Ah032252 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g168750 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg1920, Sbi_jg1921, Sbi_jg34604 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2848 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011667 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl77043 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000038304, gene:ENSEOMG00000041738 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30131070 |
| Apiaceae | Apium graveolens | 1 | Ag5G00946 |
| Arecaceae | Cocos nucifera | 1 | COCNU_01G004450 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103699427 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.3447.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G25440 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G73090.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10018923m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g28050.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB05g070270.2N, BniB07g040530.2N |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g05040 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0640s00002.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g06010 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.660 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG19.201, evm.TU.LG24.438 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g24780 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_2_RagTag.1212 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3872 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-17280 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-18781 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000009l.494 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00005872 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-12397 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-5511 |
| Salicaceae | Populus euphratica | 2 | populus_peu19850, populus_peu19851 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645004 |
| Solanaceae | Solanum chilense | 1 | SOLCI006111600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107023442 |
| Tamaricaceae | Reaumuria soongarica | 1 | MSTRG.18471_chr10_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G0627 |
| Zosteraceae | Zostera marina | 1 | Zosma01g04340.v3.1 |