Basic Information
Locus ID:
AsparagusV1_01.3237.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 124600569 | 124603663 | + | AsparagusV1_01.3237.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 48,636.05 Da | 50.90 | 84.63 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 34 | 98 | 2.5E-10 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 263 | 349 | 1.6E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 235 | 359 | 4.71E-30 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 230 | 336 | 8.9E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 260 | 434 | 15.665432 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 266 | 288 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 434 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18390.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020265630.1 | LOW QUALITY PROTEIN: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Asparagus officinalis] | 0 |
| P0C5E2 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3 | 0 | |
| TrEMBL | A0A5P1FW08 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F32370 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000035167 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103701919 |
| Asparagaceae | Asparagus officinalis | 4 | AsparagusV1_01.3235.V1.1, AsparagusV1_01.3237.V1.1 ... |
| Poaceae | Echinochloa crus-galli | 1 | AH05.1485 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G225900 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-24945 |