Basic Information
Locus ID:
AsparagusV1_01.3149.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 122196695 | 122198239 | + | AsparagusV1_01.3149.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 15,374.50 Da | 44.48 | 77.53 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05184 | Saposin-like type B, region 1 | 15 | 51 | 1.9E-11 | IPR007856 |
| Pfam | PF00026 | Eukaryotic aspartyl protease | 52 | 141 | 1.4E-26 | IPR033121 |
| SUPERFAMILY | SSF50630 | Acid proteases | 36 | 141 | 1.84E-24 | IPR021109 |
| Gene3D | G3DSA:1.10.225.10 | - | 12 | 51 | 6.1E-61 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 52 | 142 | 6.1E-61 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 1 | 139 | 18.928076 | IPR033121 |
| ProSiteProfiles | PS50015 | Saposin B type domain profile. | 12 | 102 | 10.781199 | IPR008139 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62290.1 | Saposin-like aspartyl protease family protein. | 0 |
| RefSeq | XP_020252037.1 | LOW QUALITY PROTEIN: aspartic proteinase oryzasin-1-like [Asparagus officinalis] | 0 |
| Q42456 | Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0567100 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1FX80 | Peptidase A1 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F31490 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg38318 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25822 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000010767 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G004750 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.3149.V1.1 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5128 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049989 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G098300 |
| Poaceae | Triticum aestivum | 1 | TraesCS3B02G269300.1 |
| Poaceae | Zea mays | 19 | Zm00001eb046200_P001, Zm00001eb056740_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-56591 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g09600 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-22268 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9719 |
| Zosteraceae | Zostera marina | 1 | Zosma04g06120.v3.1 |