Basic Information
Locus ID:
AsparagusV1_01.2790.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 112051834 | 112060469 | + | AsparagusV1_01.2790.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 41,717.32 Da | 36.88 | 83.83 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 73 | 341 | 2.65322E-115 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 68 | 341 | 3.4E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 54 | 341 | 3.14E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 167 | 357 | 1.3E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 151 | 1.3E-19 | - |
| SMART | SM00220 | serkin_6 | 67 | 344 | 2.1E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 67 | 344 | 42.067745 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 208 | 220 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 202 | 220 | 6.3E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 312 | 334 | 6.3E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 164 | 177 | 6.3E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 268 | 290 | 6.3E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 46 | - | - |
| Coils | Coil | Coil | 11 | 38 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50000.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020251627.1 | serine/threonine-protein kinase HT1-like [Asparagus officinalis] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FTA9 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F27900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology