Basic Information
Locus ID:
AsparagusV1_01.2765.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
TENA/THI-4/PQQC family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 111340019 | 111343209 | - | AsparagusV1_01.2765.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 16,735.10 Da | 40.93 | 102.67 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.20.910.10 | - | 1 | 76 | 1.0E-6 | IPR016084 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32470.1 | Haem oxygenase-like, multi-helical. | 0 |
| RefSeq | XP_020272115.1 | bifunctional TH2 protein, mitochondrial-like [Asparagus officinalis] | 0 |
| F4KFT7 | Bifunctional TH2 protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=TH2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FV49 | Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F27650 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.2765.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB03g041870.2N |
| Plumbaginaceae | Limonium bicolor | 4 | Lb1G02423, Lb5G27269, Lb6G32216, Lb6G32217 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000023l.39 |