halophFGD

Basic Information

Locus ID: AsparagusV1_01.2681.V1.1

Species & Taxonomic ID: Asparagus officinalis & 4686

Genome Assembly: GCA_001876935.1

Short Name: CMT1

Description: DNA (cytosine-5)-methyltransferase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	108672324	108672746	-	AsparagusV1_01.2681.V1.1

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.86	16,056.82 Da	78.47	68.93	-0.94

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	1	45	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	43	-	-

KEGG Pathway

KO Term:

K00558 (DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37])

Pathway:

ko00270 (Cysteine and methionine metabolism) map00270 (Cysteine and methionine metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Module:

M00035 (Methionine degradation)

Reaction:

R04858 (S-Adenosyl-L-methionine + DNA cytosine <=> S-Adenosyl-L-homocysteine + 5-Methylcytosine in DNA)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_020251487.1	DNA (cytosine-5)-methyltransferase CMT3-like isoform X3 [Asparagus officinalis]	0
TrEMBL	A0A5P1FU86	Nucleolin-like OS=Asparagus officinalis OX=4686 GN=A4U43_C01F26810 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg13794, jg23605, jg36130
Aizoaceae	Mesembryanthemum crystallinum	4	gene_12059, gene_2168, gene_23938, gene_3430
Amaranthaceae	Atriplex hortensis	3	Ah004889, Ah018388, Ah027458
Amaranthaceae	Beta vulgaris	4	BVRB_3g050080, BVRB_4g071490, BVRB_5g107290, BVRB_7g164870
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg13016, Sbi_jg14869, Sbi_jg18035, Sbi_jg23779 ... Sbi_jg52856, Sbi_jg55645, Sbi_jg62665, Sbi_jg7611
Amaranthaceae	Salicornia europaea	4	Seu_jg12410, Seu_jg1264, Seu_jg26200, Seu_jg9012
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00010231, GOSA_00010921, GOSA_00014366, GOSA_00017942
Amaranthaceae	Suaeda glauca	8	Sgl01110, Sgl06195, Sgl23814, Sgl28979, Sgl33949, Sgl39332 ... Sgl51217, Sgl56517
Amaranthaceae	Chenopodium album	10	gene:ENSEOMG00000000267, gene:ENSEOMG00000001655 ... gene:ENSEOMG00000005549, gene:ENSEOMG00000021096, gene:ENSEOMG00000024208, gene:ENSEOMG00000025935, gene:ENSEOMG00000029648, gene:ENSEOMG00000031445, gene:ENSEOMG00000040689, gene:ENSEOMG00000046216
Amaranthaceae	Chenopodium quinoa	7	CQ.Regalona.r1.3AG0007160, CQ.Regalona.r1.3BG0007170 ... CQ.Regalona.r1.4AG0000540, CQ.Regalona.r1.4BG0000630, CQ.Regalona.r1.5AG0001530, CQ.Regalona.r1.6AG0024980, CQ.Regalona.r1.6BG0026480
Anacardiaceae	Pistacia vera	5	pistato.v30030200, pistato.v30054360, pistato.v30172360 ... pistato.v30172370, pistato.v30197810
Apiaceae	Apium graveolens	4	Ag11G04623, Ag11G05049, Ag11G05071, Ag8G01105
Arecaceae	Cocos nucifera	3	COCNU_04G007180, COCNU_04G007220, COCNU_05G008940
Arecaceae	Phoenix dactylifera	2	gene-LOC103707986, gene-LOC103712941
Asparagaceae	Asparagus officinalis	6	AsparagusV1_01.1635.V1.1, AsparagusV1_01.2680.V1.1 ... AsparagusV1_01.2681.V1.1, AsparagusV1_03.2173.V1.1, AsparagusV1_05.968.V1.1, AsparagusV1_08.89.V1.1
Asteraceae	Flaveria trinervia	3	Ftri13G13364, Ftri2G01683, Ftri7G08977
Brassicaceae	Arabidopsis thaliana	3	AT1G69770.1, AT1G80740.1, AT4G19020.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10006850m.g.v1.0, Thhalv10018159m.g.v1.0 ... Thhalv10024250m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g10040.v2.2, Sp2g28030.v2.2, Sp7g17750.v2.2
Brassicaceae	Brassica nigra	4	BniB04g028310.2N, BniB05g017360.2N, BniB06g013250.2N ... BniB06g013260.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq01G0137, Ceq05G2187
Casuarinaceae	Casuarina glauca	2	Cgl01G0122, Cgl05G2282
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno15g07660, gene.Cymno16g05000
Dunaliellaceae	Dunaliella salina	1	Dusal.0129s00008.v1.0
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate05g07140
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG05.910, evm.TU.LG08.1063, evm.TU.LG08.789 ... evm.TU.LG09.452
Plantaginaceae	Plantago ovata	7	Pov_00000623, Pov_00019906, Pov_00020850, Pov_00022750 ... Pov_00028526, Pov_00033087, Pov_00033105
Plumbaginaceae	Limonium bicolor	4	Lb2G11984, Lb2G14941, Lb2G14947, Lb7G33201
Poaceae	Echinochloa crus-galli	6	AH01.2711, AH05.592, BH01.3040, BH05.642, CH01.3251 ... CH05.744
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0119120, gene-QOZ80_2BG0173050 ... gene-QOZ80_5AG0401060, gene-QOZ80_5BG0449640
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.4HG0386550.1, HORVU.MOREX.r3.4HG0394000.1 ... HORVU.MOREX.r3.6HG0628050.1
Poaceae	Lolium multiflorum	14	gene-QYE76_028897, gene-QYE76_029117, gene-QYE76_029530 ... gene-QYE76_030995, gene-QYE76_035944, gene-QYE76_035963, gene-QYE76_036534, gene-QYE76_036535, gene-QYE76_036900, gene-QYE76_036923, gene-QYE76_048451, gene-QYE76_057611, gene-QYE76_068908, gene-QYE76_069568
Poaceae	Oryza coarctata	4	Oco09G004880, Oco10G003930, Oco19G000130, Oco20G000170
Poaceae	Oryza sativa	4	LOC_Os03g12570.1, LOC_Os05g13780.1, LOC_Os05g13790.1 ... LOC_Os10g01570.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G251500, gene-BS78_09G088600, gene-BS78_K225600
Poaceae	Puccinellia tenuiflora	11	Pt_Chr0102392, Pt_Chr0104248, Pt_Chr0104250, Pt_Chr0200522 ... Pt_Chr0200523, Pt_Chr0200524, Pt_Chr0200526, Pt_Chr0200846, Pt_Chr0306853, Pt_Chr0306855, Pt_Chr0405152
Poaceae	Sporobolus alterniflorus	4	Chr03G002470, Chr08G002600, Chr09G006770, Chr13G017990
Poaceae	Thinopyrum elongatum	8	Tel4E01G357200, Tel4E01G403300, Tel6E01G055600 ... Tel6E01G475200, Tel6E01G688100, Tel7E01G004700, Tel7E01G005700, Tel7E01G960000
Poaceae	Triticum dicoccoides	10	gene_TRIDC1AG041150, gene_TRIDC4AG009670 ... gene_TRIDC4AG013990, gene_TRIDC4AG070470, gene_TRIDC4BG036340, gene_TRIDC4BG041110, gene_TRIDC6AG001840, gene_TRIDC6AG056600, gene_TRIDC6BG002370, gene_TRIDC6BG066120
Poaceae	Triticum aestivum	14	TraesCS4A02G077400.1, TraesCS4A02G102700.2 ... TraesCS4B02G201800.1, TraesCS4B02G233500.1, TraesCS4D02G202600.2, TraesCS4D02G234700.1, TraesCS6A02G015800.1, TraesCS6A02G380200.1, TraesCS6B02G022800.1, TraesCS6B02G419000.1, TraesCS6D02G018700.1, TraesCS6D02G364900.1, TraesCS7B02G474900.1, TraesCS7D02G537800.1
Poaceae	Zoysia japonica	3	nbis-gene-17933, nbis-gene-17934, nbis-gene-38248
Poaceae	Zoysia macrostachya	2	Zma_g15807, Zma_g27881
Portulacaceae	Portulaca oleracea	8	evm.TU.LG01.353, evm.TU.LG01.643, evm.TU.LG04.129 ... evm.TU.LG04.2961, evm.TU.LG04.402, evm.TU.LG16.645, evm.TU.LG18.1131, evm.TU.LG20.740
Posidoniaceae	Posidonia oceanica	3	gene.Posoc07g10180, gene.Posoc07g15600, gene.Posoc09g01100
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_14_RagTag.753, evm.TU.Scaffold_7_RagTag.1729 ... evm.TU.Scaffold_8_RagTag.57
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-10299, nbisL1-mrna-17713
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-13149, nbisL1-mrna-17591
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-17094, nbisL1-mrna-17703
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000018l.950, evm.TU.utg000025l.3
Rhizophoraceae	Kandelia obovata	2	Maker00003298, Maker00012350
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-15850, nbisL1-mrna-3061
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-11516, nbisL1-mrna-9003
Salicaceae	Populus euphratica	3	populus_peu04412, populus_peu34112, populus_peu35235
Solanaceae	Lycium barbarum	4	gene-LOC132604622, gene-LOC132609666, gene-LOC132626037 ... gene-LOC132626038
Solanaceae	Solanum chilense	3	SOLCI000047500, SOLCI003665100, SOLCI004429900
Solanaceae	Solanum pennellii	3	gene-LOC107007094, gene-LOC107008257, gene-LOC107028898
Tamaricaceae	Reaumuria soongarica	4	gene_13979, gene_15769, gene_3936, gene_7516
Tamaricaceae	Tamarix chinensis	2	TC01G4672, TC06G2785
Zosteraceae	Zostera marina	1	Zosma03g15410.v3.1