Basic Information
Locus ID:
AsparagusV1_01.2480.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 100323414 | 100325258 | + | AsparagusV1_01.2480.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.12 | 65,066.35 Da | 41.65 | 108.01 | 0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 185 | 208 | 0.0097 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 528 | 551 | 0.073 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 145 | 382 | 2.15E-37 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 317 | 556 | 4.32E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 417 | 614 | 2.2E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 262 | 416 | 3.4E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 261 | 1.0E-27 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 343 | 368 | 7.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 159 | 184 | 0.01 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 317 | 342 | 0.0047 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 476 | 501 | 1.6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 449 | 474 | 5.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 423 | 448 | 2.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 529 | 553 | 2.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 185 | 210 | 3.6E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 211 | 236 | 0.07 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 369 | 394 | 57.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 555 | 580 | 310.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 503 | 528 | 120.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 237 | 265 | 0.34 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 47 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_020251324.1 | LOW QUALITY PROTEIN: EIN3-binding F-box protein 1-like [Asparagus officinalis] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FW28 | EIN3-binding F-box protein 1-like OS=Asparagus officinalis OX=4686 GN=A4U43_C01F24800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology