Basic Information
Locus ID:
AsparagusV1_01.2438.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 98652561 | 98666247 | - | AsparagusV1_01.2438.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 94,077.28 Da | 57.90 | 82.09 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 490 | 759 | 3.79629E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 488 | 759 | 4.5E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 462 | 759 | 6.01E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 560 | 784 | 4.2E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 456 | 559 | 1.5E-36 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 484 | 761 | 38.407036 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 490 | 512 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 606 | 618 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 96 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56890.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020251284.1 | mucin-5AC-like isoform X2 [Asparagus officinalis] | 0 |
| Q8RWW0 | Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana OX=3702 GN=ALE2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FW05 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F24380 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology