Basic Information
Locus ID:
AsparagusV1_01.2296.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 91106611 | 91116525 | - | AsparagusV1_01.2296.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.67 | 86,517.87 Da | 48.71 | 72.98 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 20 | 165 | 3.46564E-53 | - |
| Pfam | PF00582 | Universal stress protein family | 23 | 138 | 2.0E-9 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 442 | 696 | 2.8E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 424 | 700 | 6.47E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 23 | 140 | 4.86E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 421 | 513 | 2.2E-24 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 21 | 162 | 3.7E-13 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 514 | 715 | 2.7E-48 | - |
| SMART | SM00220 | serkin_6 | 441 | 704 | 1.3E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 441 | 704 | 35.608505 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 559 | 571 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 739 | 772 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 739 | 758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 243 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 253 | - | - |
| Coils | Coil | Coil | 307 | 327 | - | - |
| Coils | Coil | Coil | 367 | 410 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_020250522.1 | U-box domain-containing protein 52-like [Asparagus officinalis] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FTZ4 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F22960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology