Basic Information
Locus ID:
AsparagusV1_01.2292.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 90981016 | 90998386 | - | AsparagusV1_01.2292.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 50,290.82 Da | 38.30 | 77.89 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 11 | 383 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 14 | 162 | 4.1E-43 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 339 | 382 | 6.3E-5 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 212 | 320 | 1.7E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 362 | 2.02E-89 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 98 | 1.4E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 99 | 337 | 1.2E-69 | - |
| SMART | SM00133 | pkinase_C_6 | 321 | 384 | 3.5E-9 | IPR000961 |
| SMART | SM00220 | serkin_6 | 13 | 320 | 5.7E-105 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 321 | 392 | 13.239367 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 13 | 320 | 46.703697 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 19 | 42 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 132 | 144 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 437 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33080.2 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_020250498.1 | serine/threonine-protein kinase 38 isoform X1 [Asparagus officinalis] | 0 |
| Q15208 | Serine/threonine-protein kinase 38 OS=Homo sapiens OX=9606 GN=STK38 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FT96 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F22920 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology