Basic Information
Locus ID:
AsparagusV1_01.2019.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 76560608 | 76561456 | - | AsparagusV1_01.2019.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 32,970.49 Da | 52.27 | 75.32 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042519468.1 | putative F-box protein At5g55150 [Macadamia integrifolia] | 0 |
| TrEMBL | A0A5P1FVA9 | DUF295 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F20190 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 9 | jg27307, jg27308, jg27310, jg27311, jg27356, jg27357 ... |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.2019.V1.1 |
| Plantaginaceae | Plantago ovata | 13 | Pov_00000234, Pov_00000235, Pov_00000236, Pov_00006650 ... |
| Solanaceae | Solanum chilense | 1 | SOLCI006708900 |