Basic Information
Locus ID:
AsparagusV1_01.1702.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 56442135 | 56445074 | + | AsparagusV1_01.1702.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.49 | 69,475.91 Da | 34.93 | 92.88 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 334 | 613 | 8.1E-45 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 304 | 3.4E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 333 | 616 | 4.37E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 310 | 3.4E-87 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 410 | 637 | 1.8E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 335 | 409 | 3.4E-20 | - |
| SMART | SM00220 | serkin_6 | 334 | 623 | 1.6E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 329 | 618 | 37.304585 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 335 | 358 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 459 | 471 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 608 | 638 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 617 | 638 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020246758.1 | LOW QUALITY PROTEIN: leucine-rich repeat receptor-like protein kinase TDR [Asparagus officinalis] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FQ82 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F17020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology