Basic Information
Locus ID:
AsparagusV1_01.17.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 120790 | 125545 | + | AsparagusV1_01.17.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 34,952.19 Da | 60.82 | 63.99 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 13 | 184 | 1.3E-80 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 109 | 182 | 1.6E-34 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 7 | 107 | 5.6E-44 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 286 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_020269661.1 | ubiquitin fusion degradation protein 1 homolog [Asparagus officinalis] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5P1FKJ5 | Ubiquitin fusion degradation protein 1 homolog OS=Asparagus officinalis OX=4686 GN=A4U43_C01F170 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology