Basic Information
Locus ID:
AsparagusV1_01.168.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 2442190 | 2449919 | - | AsparagusV1_01.168.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 77,321.99 Da | 41.90 | 87.67 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 412 | 682 | 1.1734E-88 | - |
| Pfam | PF13855 | Leucine rich repeat | 139 | 181 | 1.0E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 19 | 50 | 3.4E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 78 | 134 | 6.7E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 409 | 679 | 1.3E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 679 | 2.73E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 218 | 1.96E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 484 | 706 | 6.1E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 369 | 483 | 1.8E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 11 | 273 | 2.4E-46 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 75 | 103 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 168 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 143 | 17.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 682 | 37.233917 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 288 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_020270859.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like [Asparagus officinalis] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FLL5 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F1680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology