Basic Information
Locus ID:
AsparagusV1_01.1580.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 49432518 | 49432859 | + | AsparagusV1_01.1580.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.85 | 12,693.51 Da | 47.90 | 62.83 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 92 | 6.52E-8 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 7 | 107 | 3.2E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 113 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45800.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_008789990.4 | calmodulin-binding receptor kinase CaMRLK-like [Phoenix dactylifera] | 0 |
| Q9FK63 | Calmodulin-binding receptor kinase CaMRLK OS=Arabidopsis thaliana OX=3702 GN=CAMRLK PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FU82 | PK_Tyr_Ser-Thr domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F15800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1580.V1.1 |
| Rhizophoraceae | Rhizophora apiculata | 4 | nbisL1-mrna-20650, nbisL1-mrna-22115, nbisL1-mrna-22343 ... |
| Rhizophoraceae | Rhizophora mangle | 4 | nbisL1-mrna-23547, nbisL1-mrna-23650, nbisL1-mrna-24109 ... |