Basic Information
Locus ID:
AsparagusV1_01.152.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 2317044 | 2318488 | + | AsparagusV1_01.152.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.51 | 25,436.37 Da | 44.05 | 80.94 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1 | 165 | 4.91909E-84 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 166 | 9.2E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 166 | 1.48E-55 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 211 | 5.2E-57 | - |
| SMART | SM00220 | serkin_6 | 1 | 176 | 8.4E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 178 | 31.311769 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 42 | 54 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 36 | 54 | 4.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 145 | 167 | 4.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 82 | 92 | 4.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 101 | 123 | 4.8E-13 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020270785.1 | LOW QUALITY PROTEIN: serine/threonine-protein kinase HT1-like [Asparagus officinalis] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FL67 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F1520 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology