Basic Information
Locus ID:
AsparagusV1_01.1504.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 44403508 | 44406490 | + | AsparagusV1_01.1504.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 63,642.22 Da | 55.87 | 80.00 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 263 | 512 | 1.35964E-119 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 261 | 512 | 3.4E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 245 | 512 | 6.31E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 244 | 340 | 5.4E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 341 | 550 | 1.6E-61 | - |
| SMART | SM00220 | serkin_6 | 256 | 515 | 1.2E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 256 | 516 | 42.378693 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 380 | 392 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 483 | 505 | 2.3E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 420 | 430 | 2.3E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 374 | 392 | 2.3E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 336 | 349 | 2.3E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 439 | 461 | 2.3E-18 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 159 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020245339.1 | serine/threonine-protein kinase HT1 [Asparagus officinalis] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FQA4 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F15040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology