Basic Information
Locus ID:
AsparagusV1_01.1449.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 40931909 | 40939625 | + | AsparagusV1_01.1449.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 92,019.22 Da | 45.11 | 84.55 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 555 | 688 | 4.51393E-24 | - |
| Pfam | PF17862 | AAA+ lid domain | 711 | 753 | 3.8E-10 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 557 | 687 | 3.8E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 517 | 793 | 5.94E-60 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 40 | 351 | 3.4E-5 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 689 | 793 | 1.0E-95 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 516 | 798 | 1.0E-95 | IPR027417 |
| SMART | SM00382 | AAA_5 | 553 | 690 | 3.3E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 660 | 679 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 500 | - | - |
| Coils | Coil | Coil | 749 | 769 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28000.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_020256857.1 | spastin-like [Asparagus officinalis] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1FPB7 | AAA domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F14490 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology