Basic Information
Locus ID:
AsparagusV1_01.1423.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 38760882 | 38770011 | + | AsparagusV1_01.1423.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 118,981.39 Da | 42.92 | 96.52 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 105 | 163 | 1.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 202 | 261 | 3.8E-9 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 319 | 336 | 1.2 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 652 | 921 | 2.7E-43 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 490 | 504 | 0.85 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 358 | 5.1E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 274 | 572 | 2.11E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 640 | 924 | 2.97E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 293 | 3.8E-64 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 294 | 587 | 1.3E-72 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 730 | 951 | 3.9E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 634 | 729 | 2.7E-22 | - |
| SMART | SM00220 | serkin_6 | 650 | 949 | 1.9E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 650 | 925 | 37.050175 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 202 | 225 | 7.21911 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 774 | 786 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 656 | 679 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1041 | 1097 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_020244965.1 | LOW QUALITY PROTEIN: receptor-like protein kinase HSL1 [Asparagus officinalis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FPU6 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F14230 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology