Basic Information
Locus ID:
AsparagusV1_01.1200.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 26241048 | 26241704 | - | AsparagusV1_01.1200.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.46 | 23,471.63 Da | 30.71 | 107.80 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 23 | 44 | 0.086 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 47 | 105 | 1.3E-10 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 11 | 213 | 8.05E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 5 | 107 | 1.7E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 108 | 211 | 3.1E-24 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 68 | 91 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 140 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 20 | 44 | 51.0 | IPR003591 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020255349.1 | LOW QUALITY PROTEIN: leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 [Asparagus officinalis] | 0 |
| TrEMBL | A0A5P1FNP2 | LRRNT_2 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F12000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg6359 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30049210 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1200.V1.1 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00020657 |
| Poaceae | Echinochloa crus-galli | 2 | CH01.3016, CH06.1251 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G043200, gene-BS78_K002900 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G890400 |
| Poaceae | Triticum aestivum | 1 | TraesCSU02G171600.1.cds1 |