Basic Information
Locus ID:
AsparagusV1_01.113.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 1781789 | 1782883 | - | AsparagusV1_01.113.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 40,499.39 Da | 48.91 | 104.40 | 0.21 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020251734.1 | uncharacterized protein LOC109829069 [Asparagus officinalis] | 0 |
| TrEMBL | A0A5P1FLB9 | DUF295 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F1130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.113.V1.1, AsparagusV1_07.512.V1.1 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.1172, BH07.1248, CH08.2609 |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_2AG0108680, gene-QOZ80_2AG0108760 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0653210.1.CDS1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G116200 |
| Poaceae | Sporobolus alterniflorus | 7 | Chr06G030960, Chr09G000120, Chr09G000130, Chr09G000140 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS6A02G048400.1.cds1, TraesCS6B02G065000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb237580_P001 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-34140, nbis-gene-50953, nbis-gene-50955 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g12567, Zma_g15362 |