Basic Information
Locus ID:
Ah038132
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_291_HRSCAF_384 | 86361315 | 86367934 | - | Ah038132 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 88,767.02 Da | 41.84 | 83.23 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 93 | 288 | 1.65529E-96 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 106 | 266 | 1.2E-12 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 271 | 761 | 2.7E-182 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 624 | 744 | 2.35E-31 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 343 | 601 | 7.59E-86 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 83 | 298 | 2.62E-62 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 341 | 513 | 3.1E-69 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 71 | 314 | 8.5E-88 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 601 | 748 | 7.8E-46 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 514 | 600 | 7.3E-33 | - |
| SMART | SM00387 | HKATPase_4 | 106 | 268 | 3.6E-4 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 53 | 780 | 8.9E-237 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 104 | 113 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 201 | 223 | 4.1E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 256 | 273 | 4.1E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 274 | 292 | 4.1E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 84 | 104 | 4.1E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 172 | 189 | 4.1E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 154 | 171 | 4.1E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 105 | 127 | 4.1E-64 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 81 | 745 | 25.778294 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 757 | 786 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07770.1 | HEAT SHOCK PROTEIN 89.1. | 0 |
| RefSeq | XP_021724477.1 | heat shock protein 90-6, mitochondrial-like isoform X1 [Chenopodium quinoa] | 0 |
| F4JFN3 | Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LRA6 | HATPase_c domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology