Basic Information
Locus ID:
Ah037782
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_291_HRSCAF_384 | 77999495 | 78010724 | - | Ah037782 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 143,393.67 Da | 46.02 | 86.16 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14137 | STKc_GSK3 | 944 | 1195 | 4.27126E-148 | IPR039192 |
| Pfam | PF00069 | Protein kinase domain | 949 | 1192 | 2.2E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 948 | 1215 | 3.1E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1025 | 1227 | 3.6E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 934 | 1024 | 1.9E-30 | - |
| SMART | SM00220 | serkin_6 | 949 | 1192 | 9.3E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 949 | 1192 | 25.064541 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1047 | 1059 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30980.1 | SHAGGY-related protein kinase dZeta. Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. | 0 |
| RefSeq | XP_021750578.1 | uncharacterized protein LOC110716278 [Chenopodium quinoa] | 0 |
| Q39010 | Shaggy-related protein kinase zeta OS=Arabidopsis thaliana OX=3702 GN=ASK6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803MNV0 | DUF295 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg10742 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_20480, gene_9065 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah037782 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g202660 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg43641 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg18267 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020357 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl78051, Sgl80556 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000017186 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.9AG0000690, CQ.Regalona.r1.9BG0021690 |
| Apiaceae | Apium graveolens | 1 | Ag4G01784 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G003270, COCNU_06G003280 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103697887, gene-LOC103716030 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.396.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri15G25136, Ftri5G15556 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G18310.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10003730m.g.v1.0, Thhalv10020051m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g16450.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g046220.2N, BniB08g051880.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G2805 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2959 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno16g04140 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g17100 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-8660, nbisL1-mrna-8661 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.808 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00028132 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G19892 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0393090.1.CDS1 |
| Poaceae | Oryza coarctata | 2 | Oco05G007690, Oco06G007990 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g13720.1, LOC_Os09g01700.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G423000 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G027920, Chr01G029010, Chr12G010490, Chr12G011530 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G397100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG010160, gene_TRIDC4BG040450 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G072900.1.cds1, TraesCS4B02G229000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb399070_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-3925, nbis-gene-53873 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g26580, Zma_g4055 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG04.1694 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g04600 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.757 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-1202 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4178 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-6435 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000019l.316 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012647 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5219 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13194 |
| Salicaceae | Populus euphratica | 1 | populus_peu29651 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645188 |
| Solanaceae | Solanum chilense | 1 | SOLCI002883700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107008296 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_132 |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G0571 |
| Zosteraceae | Zostera marina | 1 | Zosma05g13760.v3.1 |