Basic Information
Locus ID:
Ah037672
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the universal ribosomal protein uS3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_291_HRSCAF_384 | 73916016 | 73918078 | + | Ah037672 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 22,557.17 Da | 34.13 | 93.02 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02413 | 40S_S3_KH | 15 | 77 | 5.92942E-37 | - |
| SUPERFAMILY | SSF54814 | Prokaryotic type KH domain (KH-domain type II) | 10 | 79 | 6.98E-13 | IPR009019 |
| SUPERFAMILY | SSF54821 | Ribosomal protein S3 C-terminal domain | 93 | 151 | 5.36E-9 | IPR036419 |
| Gene3D | G3DSA:3.30.300.20 | - | 1 | 75 | 1.5E-29 | IPR015946 |
| Gene3D | G3DSA:3.30.1140.32 | - | 140 | 181 | 1.6E-11 | IPR036419 |
| Gene3D | G3DSA:3.30.1140.32 | - | 84 | 139 | 9.4E-15 | IPR036419 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35530.1 | Ribosomal protein S3 family protein. | 0 |
| RefSeq | XP_021715029.1 | 40S ribosomal protein S3-3-like [Chenopodium quinoa] | 0 |
| Q9FJA6 | Small ribosomal subunit protein uS3x OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MG89 | 30S ribosomal protein S3, chloroplastic OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology