Basic Information
Locus ID:
Ah037565
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
WD repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_291_HRSCAF_384 | 69692660 | 69696304 | - | Ah037565 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 52,152.88 Da | 52.14 | 94.14 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 206 | 405 | 3.66E-17 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 191 | 428 | 2.3E-19 | IPR015943 |
| SMART | SM00320 | WD40_4 | 209 | 249 | 2.5E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 329 | 367 | 46.0 | IPR001680 |
| ProSiteProfiles | PS50896 | LIS1 homology (LisH) motif profile. | 15 | 47 | 7.652837 | IPR006594 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 216 | 258 | 9.706414 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G08560.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_018836362.2 | WD repeat-containing protein 26 homolog isoform X2 [Juglans regia] | 0 |
| Q9FNN2 | WD repeat-containing protein 26 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR26 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LS31 | WD repeat-containing protein 26 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology