HalophFGD

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Basic Information
Locus ID: Ah037108
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: F-box kelch-repeat protein At3g06240-like
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_291_HRSCAF_384 44931015 44932746 + Ah037108
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.22 26,634.60 Da 33.22 61.55 -0.80
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 15 78 2.49E-7 IPR036047
MobiDBLite mobidb-lite consensus disorder prediction 188 214 - -
MobiDBLite mobidb-lite consensus disorder prediction 178 239 - -
Coils Coil Coil 184 204 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021736586.1 putative F-box/kelch-repeat protein At1g12870 [Chenopodium quinoa] 0
TrEMBL A0A803LMX0 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 4 Ah006920, Ah010347, Ah010827, Ah037108
Amaranthaceae Salicornia bigelovii 1 Sbi_jg46576
Amaranthaceae Suaeda glauca 3 Sgl70951, Sgl74470, Sgl74565
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000019836, gene:ENSEOMG00000020147
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.3AG0025030, CQ.Regalona.r1.4BG0008370 ...
CQ.Regalona.r1.7BG0009430, CQ.Regalona.r1.7BG0009440
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.