Basic Information
Locus ID:
Ah036378
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
SERK5
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_291_HRSCAF_384 | 12288965 | 12296113 | + | Ah036378 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 64,703.13 Da | 40.08 | 101.03 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 253 | 522 | 1.9E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 116 | 176 | 1.8E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 1.1E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 223 | 1.5E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 230 | 526 | 3.64E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 201 | 8.0E-52 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 223 | 326 | 1.0E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 328 | 544 | 3.5E-62 | - |
| SMART | SM00220 | serkin_6 | 251 | 525 | 4.0E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 251 | 536 | 35.269291 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 374 | 386 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 257 | 279 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 163 | 176 | 8.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 118 | 131 | 8.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33430.1 | BRI1-associated receptor kinase. Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. | 0 |
| RefSeq | XP_021721127.1 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Chenopodium quinoa] | 0 |
| Q94F62 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9R994 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_092500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah036378 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg39749, Sbi_jg55102 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg14592 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl12466, Sgl17744 |