Basic Information
Locus ID:
Ah036212
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_291_HRSCAF_384 | 8227468 | 8232913 | + | Ah036212 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 101,348.31 Da | 31.95 | 102.87 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 267 | 326 | 3.2E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 7.0E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 243 | 265 | 0.79 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 121 | 180 | 8.8E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 694 | 866 | 6.8E-33 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 458 | 517 | 9.6E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 685 | 913 | 5.53E-56 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 363 | 616 | 1.04E-58 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 76 | 423 | 1.33E-69 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 333 | 628 | 4.9E-87 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 139 | 8.7E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 770 | 869 | 1.2E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 228 | 2.2E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 332 | 5.3E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 658 | 769 | 3.4E-24 | - |
| SMART | SM00220 | serkin_6 | 693 | 914 | 1.1E-11 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 119 | 143 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 409 | 433 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 552 | 576 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 312 | 9.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 480 | 504 | 5.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 168 | 300.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 927 | 30.407194 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 814 | 826 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021755952.1 | receptor protein kinase CLAVATA1-like [Chenopodium quinoa] | 0 |
| Q8GRU6 | Leucine-rich repeat receptor-like kinase protein HAR1 OS=Lotus japonicus OX=34305 GN=HAR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N6X2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology