Basic Information
Locus ID:
Ah035997
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
ubiquitin receptor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_291_HRSCAF_384 | 3990657 | 4001331 | - | Ah035997 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.70 | 36,180.64 Da | 33.14 | 70.91 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 7 | 76 | 9.5E-7 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 78 | 1.54E-11 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 77 | 2.5E-12 | - |
| SMART | SM00213 | ubq_7 | 1 | 76 | 3.4E-5 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 77 | 10.157434 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 167 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 218 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_027770318.1 | ubiquitin receptor RAD23c isoform X4 [Solanum pennellii] | 0 |
| TrEMBL | A0A6N2CIF2 | Ubiquitin receptor RAD23 OS=Solanum chilense OX=4083 GN=EJD97_007573 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.