Basic Information
Locus ID:
Ah035594
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 93125262 | 93129746 | - | Ah035594 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 62,989.64 Da | 28.77 | 87.56 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 36 | 439 | 6.9E-35 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 516 | 565 | 1.45E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 525 | 570 | 4.4E-9 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 28 | 202 | 4.5E-14 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 249 | 441 | 2.4E-24 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021739425.1 | receptor-like protein kinase FERONIA [Chenopodium quinoa] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LCB4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah035594 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl62650, Sgl67211, Sgl67272 |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.2BG0019900, CQ.Regalona.r1.2BG0019920 ... |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG03.512 |