Basic Information
Locus ID:
Ah035474
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 92187491 | 92192018 | - | Ah035474 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 67,409.71 Da | 35.50 | 99.12 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 21 | 57 | 1.8E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 146 | 352 | 2.35E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 19 | 68 | 1.44E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 59 | 3.0E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 382 | 1.8E-6 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 19 | 55 | 8.729132 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59000.2 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021755129.1 | F-box/FBD/LRR-repeat protein At5g56420-like [Chenopodium quinoa] | 0 |
| Q2V3N5 | F-box protein At3g59000 OS=Arabidopsis thaliana OX=3702 GN=At3g59000 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803M4E2 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology