Basic Information
Locus ID:
Ah035319
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 90717313 | 90720682 | - | Ah035319 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 46,397.66 Da | 37.13 | 76.46 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 98 | 237 | 2.3E-30 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 261 | 376 | 1.5E-9 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 100 | 377 | 2.38E-48 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 236 | 381 | 9.1E-24 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 70 | 235 | 3.3E-28 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 69 | 422 | 12.398115 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 298 | 309 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_021769474.1 | aspartic proteinase CDR1-like [Chenopodium quinoa] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M3T4 | Peptidase A1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology