Basic Information
Locus ID:
Ah035064
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 88233559 | 88236757 | + | Ah035064 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 108,883.81 Da | 40.07 | 104.51 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 695 | 863 | 4.9E-31 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 123 | 182 | 6.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 268 | 327 | 8.2E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 388 | 3.74E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 946 | 4.59E-56 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 295 | 634 | 2.28E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 678 | 772 | 1.1E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 864 | 965 | 2.4E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 211 | 1.8E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 212 | 456 | 2.3E-69 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 773 | 863 | 4.1E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 457 | 631 | 1.7E-36 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 97 | 121 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 314 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 552 | 576 | 15.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 693 | 969 | 1.8E-12 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 5.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 147 | 170 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 55.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 148 | 171 | 7.1113 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 969 | 25.926716 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 530 | 552 | 7.011191 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 829 | 841 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021776421.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N4A7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology