halophFGD

Basic Information

Locus ID: Ah035062

Species & Taxonomic ID: Atriplex hortensis & 34272

Genome Assembly: Atriplex hortensis v2.0

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Scaffold_1311_HRSCAF_2062	88204436	88220615	+	Ah035062

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.59	295,451.41 Da	34.48	103.85	-0.10

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF08263	Leucine rich repeat N-terminal domain	1724	1759	3.7E-6	IPR013210
Pfam	PF00069	Protein kinase domain	1522	1713	9.8E-29	IPR000719
Pfam	PF00069	Protein kinase domain	690	946	5.7E-42	IPR000719
Pfam	PF00069	Protein kinase domain	2400	2634	1.7E-45	IPR000719
Pfam	PF13855	Leucine rich repeat	1271	1330	8.1E-9	IPR001611
Pfam	PF13855	Leucine rich repeat	1981	2040	1.1E-6	IPR001611
Pfam	PF08263	Leucine rich repeat N-terminal domain	1014	1049	6.0E-4	IPR013210
Pfam	PF13855	Leucine rich repeat	1126	1185	1.2E-6	IPR001611
Pfam	PF13855	Leucine rich repeat	526	584	2.2E-6	IPR001611
Pfam	PF08263	Leucine rich repeat N-terminal domain	31	67	6.5E-7	IPR013210
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	676	967	9.31E-67	IPR011009
SUPERFAMILY	SSF52058	L domain-like	1738	1979	9.3E-46	-
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	1507	1715	1.75E-47	IPR011009
SUPERFAMILY	SSF52047	RNI-like	1950	2328	1.65E-53	-
SUPERFAMILY	SSF52058	L domain-like	1269	1458	2.47E-39	-
SUPERFAMILY	SSF52047	RNI-like	74	395	1.26E-56	-
SUPERFAMILY	SSF52047	RNI-like	327	627	2.51E-41	-
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	2386	2640	3.37E-67	IPR011009
SUPERFAMILY	SSF52047	RNI-like	1047	1287	9.42E-47	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	207	452	3.8E-64	IPR032675
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1505	1722	1.8E-51	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	453	627	1.6E-36	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	1269	1387	1.5E-27	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	1388	1464	6.4E-14	IPR032675
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	2383	2655	3.1E-72	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	1166	1268	5.7E-24	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	1881	2052	1.6E-45	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	2053	2337	1.8E-69	IPR032675
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	670	766	4.1E-19	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	767	976	2.3E-51	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	1012	1165	1.4E-37	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	1723	1879	4.8E-39	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	28	206	2.3E-45	IPR032675
SMART	SM00369	LRR_typ_2	166	190	280.0	IPR003591
SMART	SM00369	LRR_typ_2	93	117	220.0	IPR003591
SMART	SM00365	LRR_sd22_2	1956	1982	3.1	-
SMART	SM00369	LRR_typ_2	239	263	2.2	IPR003591
SMART	SM00369	LRR_typ_2	1222	1246	10.0	IPR003591
SMART	SM00369	LRR_typ_2	548	572	24.0	IPR003591
SMART	SM00369	LRR_typ_2	1076	1099	95.0	IPR003591
SMART	SM00369	LRR_typ_2	1317	1341	4.6	IPR003591
SMART	SM00365	LRR_sd22_2	93	118	460.0	-
SMART	SM00365	LRR_sd22_2	2262	2285	550.0	-
SMART	SM00365	LRR_sd22_2	571	594	700.0	-
SMART	SM00365	LRR_sd22_2	166	195	610.0	-
SMART	SM00365	LRR_sd22_2	1198	1217	610.0	-
SMART	SM00365	LRR_sd22_2	1222	1241	410.0	-
SMART	SM00365	LRR_sd22_2	1246	1265	21.0	-
SMART	SM00365	LRR_sd22_2	1269	1301	130.0	-
SMART	SM00365	LRR_sd22_2	1149	1178	190.0	-
SMART	SM00220	serkin_6	2398	2658	8.3E-26	IPR000719
SMART	SM00369	LRR_typ_2	2262	2286	5.9	IPR003591
SMART	SM00365	LRR_sd22_2	1076	1102	31.0	-
SMART	SM00365	LRR_sd22_2	263	289	34.0	-
SMART	SM00220	serkin_6	1519	1849	8.2E-11	IPR000719
SMART	SM00369	LRR_typ_2	1173	1197	44.0	IPR003591
SMART	SM00365	LRR_sd22_2	1786	1818	29.0	-
SMART	SM00369	LRR_typ_2	1932	1956	1.0	IPR003591
SMART	SM00220	serkin_6	687	973	1.1E-25	IPR000719
SMART	SM00369	LRR_typ_2	334	358	160.0	IPR003591
SMART	SM00369	LRR_typ_2	2027	2051	11.0	IPR003591
SMART	SM00369	LRR_typ_2	2123	2146	85.0	IPR003591
SMART	SM00369	LRR_typ_2	500	524	39.0	IPR003591
SMART	SM00369	LRR_typ_2	2214	2238	350.0	IPR003591
ProSiteProfiles	PS50011	Protein kinase domain profile.	2398	2658	36.315205	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	687	973	36.993637	IPR000719
ProSiteProfiles	PS51450	Leucine-rich repeat profile.	241	263	7.596445	IPR001611
ProSiteProfiles	PS50011	Protein kinase domain profile.	1519	1824	23.919687	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	823	835	-	IPR008271
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	1660	1672	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	2404	2427	-	IPR017441
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	2541	2553	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	693	716	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K00924 (receptor protein kinase TMK [EC:2.7.11.1])

Best hit

Source	Best Hit ID	Description
TAIR	AT5G25930.1	Protein kinase family protein with leucine-rich repeat domain.
RefSeq	XP_021847707.1	receptor-like protein kinase HSL1 [Spinacia oleracea]
Swiss-Prot	Q9SGP2	Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1
TrEMBL	A0A803LBI8	Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg23899, jg23902, jg23903, jg31658, jg32970, jg4549
Aizoaceae	Mesembryanthemum crystallinum	16	gene_12923, gene_12924, gene_13201, gene_13202, gene_13203 ... gene_13204, gene_13223, gene_13224, gene_13225, gene_8122, gene_8123, gene_8124, gene_8125, gene_8126, gene_8127, gene_8128
Amaranthaceae	Atriplex hortensis	3	Ah035058, Ah035062, Ah035064
Amaranthaceae	Beta vulgaris	4	BVRB_2g032780, BVRB_2g032790, BVRB_2g032800, BVRB_2g032810
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg20913, Sbi_jg22871
Amaranthaceae	Salicornia europaea	1	Seu_jg16733
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00018166
Amaranthaceae	Suaeda glauca	2	Sgl62289, Sgl66836
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000018127, gene:ENSEOMG00000018775 ... gene:ENSEOMG00000019088, gene:ENSEOMG00000019717, gene:ENSEOMG00000020085, gene:ENSEOMG00000047937, gene:ENSEOMG00000049253, gene:ENSEOMG00000051765
Amaranthaceae	Chenopodium quinoa	7	CQ.Regalona.r1.2AG0015020, CQ.Regalona.r1.2AG0015040 ... CQ.Regalona.r1.2AG0015050, CQ.Regalona.r1.2BG0017130, CQ.Regalona.r1.2BG0017140, CQ.Regalona.r1.2BG0017150, CQ.Regalona.r1.2BG0017160
Anacardiaceae	Pistacia vera	12	pistato.v30168210, pistato.v30168230, pistato.v30254050 ... pistato.v30254070, pistato.v30254100, pistato.v30254130, pistato.v30257250, pistato.v30257260, pistato.v30257300, pistato.v30257330, pistato.v30257340, pistato.v30257350
Apiaceae	Apium graveolens	5	Ag7G00332, Ag7G01921, Ag8G00329, Ag9G01447, Ag9G02626
Arecaceae	Cocos nucifera	6	COCNU_02G001660, COCNU_03G014930, COCNU_06G004330 ... COCNU_06G004340, COCNU_14G002970, scaffold017116G000010
Arecaceae	Phoenix dactylifera	5	gene-LOC103698393, gene-LOC103700466, gene-LOC103706753 ... gene-LOC103710231, gene-LOC120112395
Asparagaceae	Asparagus officinalis	3	AsparagusV1_05.2682.V1.1, AsparagusV1_06.1208.V1.1 ... AsparagusV1_06.1209.V1.1
Asteraceae	Flaveria trinervia	4	Ftri14G22916, Ftri15G06208, Ftri16G03105, Ftri7G05435
Brassicaceae	Arabidopsis thaliana	1	AT5G25930.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10003585m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp2g21740.v2.2
Brassicaceae	Brassica nigra	4	BniB02g078280.2N, BniB02g078290.2N, BniB02g078300.2N ... BniB04g004140.2N
Casuarinaceae	Casuarina equisetifolia	9	Ceq01G0058, Ceq01G0062, Ceq03G0037, Ceq03G0038, Ceq03G0039 ... Ceq03G0040, Ceq04G2063, Ceq06G0067, Ceq06G1562
Casuarinaceae	Casuarina glauca	6	Cgl01G0022, Cgl03G0046, Cgl04G2257, Cgl06G0074, Cgl06G1619 ... Cgl06G1621
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno12g02450, gene.Cymno16g03820
Dunaliellaceae	Dunaliella salina	1	Dusal.0324s00010.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate07g16860, gene.Thate09g16420, gene.Thate09g16430
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-252
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG07.1159, evm.TU.LG07.840
Plantaginaceae	Plantago ovata	2	Pov_00003450, Pov_00013571
Plumbaginaceae	Limonium bicolor	6	Lb1G04714, Lb1G04727, Lb1G05171, Lb1G05195, Lb2G14154 ... Lb3G21111
Poaceae	Echinochloa crus-galli	22	AH02.3138, AH02.3139, AH05.1684, AH05.360, AH06.2008 ... AH06.2009, AH06.2296, AH07.1041, BH01.5239, BH02.3203, BH02.3204, BH05.1831, BH05.417, BH06.1839, BH07.3954, CH02.3314, CH02.3317, CH05.1927, CH05.477, CH06.2028, CH07.766, CH07.939
Poaceae	Eleusine coracana subsp. coracana	19	gene-QOZ80_1AG0032710, gene-QOZ80_1BG0082870 ... gene-QOZ80_2AG0106610, gene-QOZ80_2AG0107050, gene-QOZ80_2AG0108010, gene-QOZ80_2BG0160680, gene-QOZ80_2BG0161640, gene-QOZ80_4AG0303360, gene-QOZ80_4BG0334250, gene-QOZ80_4BG0334280, gene-QOZ80_5AG0366080, gene-QOZ80_5AG0383890, gene-QOZ80_5BG0413900, gene-QOZ80_5BG0430690, gene-QOZ80_5BG0449760, gene-QOZ80_6AG0542820, gene-QOZ80_6AG0542830, gene-QOZ80_6BG0496020, gene-QOZ80_6BG0496030
Poaceae	Hordeum vulgare	11	HORVU.MOREX.r3.1HG0006720.1.CDS1 ... HORVU.MOREX.r3.1HG0006740.1.CDS1, HORVU.MOREX.r3.1HG0006770.1.CDS1, HORVU.MOREX.r3.1HG0076630.1, HORVU.MOREX.r3.3HG0287850.1, HORVU.MOREX.r3.6HG0580210.1, HORVU.MOREX.r3.6HG0624460.1, HORVU.MOREX.r3.7HG0637550.1.CDS1, HORVU.MOREX.r3.7HG0648000.1, HORVU.MOREX.r3.7HG0673710.1, HORVU.MOREX.r3.7HG0718040.1
Poaceae	Lolium multiflorum	5	gene-QYE76_015921, gene-QYE76_015986, gene-QYE76_034443 ... gene-QYE76_034447, gene-QYE76_055320
Poaceae	Oryza coarctata	12	Oco02G020350, Oco03G005860, Oco03G006080, Oco04G006080 ... Oco04G006330, Oco04G006340, Oco09G014620, Oco10G014600, Oco11G011100, Oco12G011190, Oco12G011200, Oco12G011210
Poaceae	Oryza sativa	10	LOC_Os01g53920.1, LOC_Os02g12910.1, LOC_Os02g13420.1 ... LOC_Os02g13430.1, LOC_Os02g13460.1, LOC_Os02g13510.1, LOC_Os05g44770.1, LOC_Os06g36270.3, LOC_Os06g36310.1, LOC_Os06g36320.1
Poaceae	Paspalum vaginatum	12	gene-BS78_03G271900, gene-BS78_03G272000, gene-BS78_K050100 ... gene-BS78_04G094300, gene-BS78_04G105500, gene-BS78_07G030600, gene-BS78_08G053400, gene-BS78_08G053600, gene-BS78_08G123500, gene-BS78_09G207700, gene-BS78_10G165200, gene-BS78_10G165300
Poaceae	Puccinellia tenuiflora	9	Pt_Chr0102051, Pt_Chr0102884, Pt_Chr0400441, Pt_Chr0400452 ... Pt_Chr0504113, Pt_Chr0600213, Pt_Chr0602247, Pt_Chr0602287, Pt_Chr0605380
Poaceae	Sporobolus alterniflorus	10	Chr02G028940, Chr03G015800, Chr05G006600, Chr05G023380 ... Chr08G015900, Chr0G009790, Chr10G009440, Chr15G023290, Chr18G014300, Chr22G003240
Poaceae	Thinopyrum elongatum	5	Tel3E01G455700, Tel5E01G585000, Tel7E01G173400 ... Tel7E01G625700, Telscf48801G000100
Poaceae	Triticum dicoccoides	13	gene_TRIDC1AG050590, gene_TRIDC1BG057420 ... gene_TRIDC2BG000240, gene_TRIDC3AG021220, gene_TRIDC3AG041020, gene_TRIDC3BG046270, gene_TRIDC4AG060560, gene_TRIDC5BG057730, gene_TRIDC6AG027350, gene_TRIDC6AG053870, gene_TRIDC6BG033510, gene_TRIDC7AG049870, gene_TRIDC7BG043940
Poaceae	Triticum aestivum	28	TraesCS1A02G342600.1, TraesCS1B02G355700.1 ... TraesCS1D02G344700.1, TraesCS2A02G001700.1.cds1, TraesCS2B02G021400.1.cds1, TraesCS3A02G276200.2, TraesCS3B02G309900.1, TraesCS3B02G310000.1, TraesCS3D02G276100.1, TraesCS3D02G276200.2, TraesCS4A02G380300.2, TraesCS4A02G381100.1, TraesCS6A02G187400.1, TraesCS6A02G359600.2, TraesCS6B02G217100.1, TraesCS6B02G392500.1, TraesCS6D02G174300.1, TraesCS6D02G342500.1, TraesCS6D02G342600.1.cds1, TraesCS7A02G028300.1.cds1, TraesCS7A02G082600.1, TraesCS7A02G356900.1, TraesCS7B02G270900.1, TraesCS7D02G077200.1, TraesCS7D02G365800.1, TraesCSU02G101700.1.cds1, TraesCSU02G175600.1, TraesCSU02G214400.1
Poaceae	Zea mays	7	Zm00001eb083330_P001, Zm00001eb153630_P001 ... Zm00001eb204350_P002, Zm00001eb239600_P001, Zm00001eb277420_P001, Zm00001eb293660_P001, Zm00001eb384580_P002
Poaceae	Zoysia japonica	5	nbis-gene-13874, nbis-gene-22917, nbis-gene-34193 ... nbis-gene-41200, nbis-gene-41201
Poaceae	Zoysia macrostachya	7	Zma_g15394, Zma_g15433, Zma_g20487, Zma_g24841, Zma_g27250 ... Zma_g32940, Zma_g8624
Portulacaceae	Portulaca oleracea	10	evm.TU.LG07.719, evm.TU.LG07.720, evm.TU.LG07.722 ... evm.TU.LG07.724, evm.TU.LG07.725, evm.TU.LG15.212, evm.TU.LG15.213, evm.TU.LG15.215, evm.TU.LG15.216, evm.TU.LG15.217
Posidoniaceae	Posidonia oceanica	4	gene.Posoc08g12490, gene.Posoc08g12500, gene.Posoc09g06650 ... gene.Posoc09g06660
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_10_RagTag.752, evm.TU.Scaffold_4_RagTag.1896
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-13739, nbisL1-mrna-13742
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-14173
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-4670, nbisL1-mrna-8996
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000008l.1081, evm.TU.utg000033l.526
Rhizophoraceae	Kandelia obovata	2	Maker00001236, Maker00015187
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-22721, nbisL1-mrna-3859
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-1181, nbisL1-mrna-7972
Salicaceae	Populus euphratica	12	populus_peu04986, populus_peu04987, populus_peu05355 ... populus_peu05356, populus_peu05357, populus_peu05367, populus_peu05368, populus_peu05369, populus_peu05371, populus_peu05381, populus_peu05382, populus_peu12719
Solanaceae	Lycium barbarum	12	gene-LOC132599916, gene-LOC132600349, gene-LOC132600351 ... gene-LOC132635782, gene-LOC132635834, gene-LOC132635843, gene-LOC132636645, gene-LOC132636830, gene-LOC132636831, gene-LOC132636834, gene-LOC132637392, gene-LOC132637398
Solanaceae	Solanum chilense	3	SOLCI004927300, SOLCI005823900, SOLCI006937100
Solanaceae	Solanum pennellii	4	gene-LOC107007675, gene-LOC107027903, gene-LOC107028118 ... gene-LOC107028124
Tamaricaceae	Reaumuria soongarica	1	STRG.4720_chr03_-
Tamaricaceae	Tamarix chinensis	1	TC01G2578
Zosteraceae	Zostera marina	4	Zosma04g09240.v3.1, Zosma05g13120.v3.1, Zosma05g13230.v3.1 ... Zosma05g13270.v3.1