Basic Information
Locus ID:
Ah035061
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 88195228 | 88196385 | + | Ah035061 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 42,913.64 Da | 25.45 | 102.55 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 193 | 209 | 1.5 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 240 | 262 | 1.1 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 4 | 231 | 2.15E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 165 | 382 | 2.21E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 95 | 158 | 6.1E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 94 | 2.6E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 159 | 385 | 9.8E-55 | IPR032675 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25910.1 | receptor like protein 52. putative disease resistance protein induced by chitin oligomers. | 0 |
| RefSeq | XP_021776424.1 | LOW QUALITY PROTEIN: receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| Q7FZR1 | Receptor-like protein 52 OS=Arabidopsis thaliana OX=3702 GN=RLP52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N4A9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah035061 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30022470 |
| Apiaceae | Apium graveolens | 1 | Ag8G00331 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G30941 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G0025 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.1897 |