Basic Information
Locus ID:
Ah035058
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 88139558 | 88144056 | + | Ah035058 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 114,435.29 Da | 37.37 | 99.73 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 700 | 982 | 6.95225E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 695 | 977 | 3.5E-46 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 122 | 144 | 0.8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 70 | 9.9E-8 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 291 | 594 | 2.04E-48 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 375 | 2.62E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 689 | 983 | 1.89E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 386 | 457 | 5.7E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 677 | 773 | 1.3E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 290 | 5.8E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 774 | 1002 | 8.3E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 458 | 643 | 3.2E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 185 | 5.5E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 385 | 6.3E-22 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 552 | 576 | 5.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 120 | 230.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 575 | 596 | 440.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 242 | 265 | 200.0 | - |
| SMART | SM00369 | LRR_typ_2 | 242 | 266 | 6.1 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 266 | 292 | 3.6 | - |
| SMART | SM00369 | LRR_typ_2 | 504 | 528 | 38.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 169 | 198 | 320.0 | - |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 340.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 96 | 115 | 57.0 | - |
| SMART | SM00220 | serkin_6 | 694 | 978 | 3.8E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 694 | 986 | 37.149113 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 700 | 723 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 831 | 843 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739110.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology