Basic Information
Locus ID:
Ah034859
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 85545519 | 85555581 | + | Ah034859 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 99,885.59 Da | 47.52 | 60.77 | -1.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 663 | 707 | 7.86462E-5 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 64 | 236 | 2.46E-7 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 660 | 699 | 6.77E-7 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 651 | 709 | 3.3E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 711 | 921 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 597 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 872 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 487 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 772 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 907 | 921 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 652 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 605 | 652 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 850 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 377 | - | - |
| Coils | Coil | Coil | 27 | 47 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_021769435.1 | ABC transporter F family member 4-like [Chenopodium quinoa] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R3I5 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_111020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology