Basic Information
Locus ID:
Ah034703
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 83943846 | 83945759 | - | Ah034703 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 67,901.22 Da | 37.24 | 105.75 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 554 | 574 | 0.21 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 231 | 254 | 0.047 | IPR001611 |
| Pfam | PF12937 | F-box-like | 66 | 99 | 2.3E-6 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 528 | 549 | 0.097 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 258 | 281 | 0.73 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 335 | 596 | 4.19E-37 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 166 | 407 | 1.88E-36 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 53 | 101 | 1.44E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 499 | 592 | 3.0E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 439 | 498 | 4.3E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 245 | 433 | 2.5E-36 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 56 | 107 | 1.4E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 244 | 3.8E-22 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 499 | 524 | 0.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 258 | 283 | 6.5E-4 | IPR006553 |
| SMART | SM00256 | fbox_2 | 67 | 108 | 5.8E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 364 | 389 | 0.014 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 206 | 231 | 2.1E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 444 | 469 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 232 | 257 | 13.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 526 | 551 | 9.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 338 | 363 | 0.058 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 390 | 415 | 28.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 180 | 205 | 0.002 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 552 | 576 | 0.0013 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 470 | 495 | 0.29 | IPR006553 |
| Coils | Coil | Coil | 104 | 124 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021738606.1 | EIN3-binding F-box protein 1-like [Chenopodium quinoa] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RGU6 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_074260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology