Basic Information
Locus ID:
Ah034494
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 81416348 | 81422391 | + | Ah034494 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 84,838.48 Da | 43.39 | 79.96 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 15 | 151 | 1.99021E-51 | - |
| Pfam | PF00069 | Protein kinase domain | 430 | 683 | 2.5E-40 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 17 | 149 | 6.2E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 410 | 686 | 5.8E-68 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 16 | 151 | 9.3E-7 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 404 | 499 | 1.5E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 703 | 3.5E-47 | - |
| SMART | SM00220 | serkin_6 | 427 | 691 | 5.8E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 691 | 34.096169 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 545 | 557 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 718 | 764 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 711 | 764 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 219 | - | - |
| Coils | Coil | Coil | 360 | 399 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021763738.1 | U-box domain-containing protein 52-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N1Z3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology