Basic Information
Locus ID:
Ah034073
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 73708497 | 73712486 | - | Ah034073 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 76,642.17 Da | 44.64 | 90.88 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 396 | 650 | 4.1E-29 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 126 | 185 | 7.6E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 73 | 1.0E-11 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 396 | 657 | 3.84E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 235 | 6.8E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 468 | 671 | 2.5E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 360 | 466 | 1.6E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 191 | 1.3E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 192 | 239 | 4.9E-8 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 392 | 658 | 24.909067 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 260 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_021715870.1 | pollen receptor-like kinase 1 [Chenopodium quinoa] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MET9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology