halophFGD

Basic Information

Locus ID: Ah033881

Species & Taxonomic ID: Atriplex hortensis & 34272

Genome Assembly: Atriplex hortensis v2.0

Description: Phosphatidate

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Scaffold_1311_HRSCAF_2062	67690237	67691492	+	Ah033881

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.58	11,120.98 Da	58.96	98.56	0.21

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01148	Cytidylyltransferase family	53	92	7.1E-9	-

KEGG Pathway

KO Term:

K00981 (phosphatidate cytidylyltransferase [EC:2.7.7.41])

Pathway:

ko00564 (Glycerophospholipid metabolism) map00564 (Glycerophospholipid metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko04070 (Phosphatidylinositol signaling system) map04070 (Phosphatidylinositol signaling system)

Module:

M00093 (Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE)

Reaction:

R01799 (CTP + Phosphatidate <=> Diphosphate + CDP-diacylglycerol)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G60620.2	-
RefSeq	XP_021727694.1	phosphatidate cytidylyltransferase 4, chloroplastic-like isoform X1 [Chenopodium quinoa]
Swiss-Prot	Q9M001	Phosphatidate cytidylyltransferase 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDS5 PE=1 SV=1
TrEMBL	A0A803MT57	Phosphatidate cytidylyltransferase OS=Chenopodium quinoa OX=63459 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	1	Ah033881
Amaranthaceae	Suaeda glauca	4	Sgl64505, Sgl64508, Sgl64510, Sgl68968