Basic Information
Locus ID:
Ah033219
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 36233788 | 36247246 | + | Ah033219 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 125,657.43 Da | 41.14 | 71.19 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 178 | 273 | 9.58077E-45 | - |
| CDD | cd13999 | STKc_MAP3K-like | 870 | 1127 | 2.32715E-112 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 866 | 1126 | 9.1E-63 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 191 | 273 | 2.5E-18 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 190 | 280 | 4.86E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 849 | 1124 | 1.52E-77 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 195 | 276 | 4.5E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 952 | 1138 | 3.8E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 857 | 951 | 1.1E-25 | - |
| SMART | SM00666 | PB1_new | 189 | 276 | 5.6E-32 | IPR000270 |
| SMART | SM00220 | serkin_6 | 864 | 1131 | 1.1E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 864 | 1131 | 41.035961 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 989 | 1001 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 870 | 895 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 946 | 959 | 6.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 983 | 1001 | 6.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1054 | 1076 | 6.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1098 | 1120 | 6.1E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 664 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 675 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021770941.1 | uncharacterized protein LOC110735099 isoform X1 [Chenopodium quinoa] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N065 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology