Basic Information
Locus ID:
Ah033207
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Ribosomal protein L2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1311_HRSCAF_2062 | 35920085 | 35922829 | + | Ah033207 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 35,828.30 Da | 44.05 | 82.05 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03947 | Ribosomal Proteins L2, C-terminal domain | 263 | 317 | 3.0E-16 | IPR022669 |
| SUPERFAMILY | SSF50104 | Translation proteins SH3-like domain | 262 | 317 | 3.01E-15 | IPR008991 |
| Gene3D | G3DSA:4.10.950.10 | Ribosomal protein L2, domain 3 | 283 | 317 | 3.8E-10 | IPR014726 |
| SMART | SM01382 | Ribosomal_L2_C_2 | 231 | 317 | 1.1E-5 | IPR022669 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44065.1 | Ribosomal protein L2 family. | 0 |
| RefSeq | XP_021722345.1 | uncharacterized protein LOC110689827 [Chenopodium quinoa] | 0 |
| P0C8K6 | Large ribosomal subunit protein uL2m OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803M9J0 | ULP_PROTEASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.